load_rt_trajectories.RdThis function loads the Rt trajectories of an EpiFusion analysis into a list of dataframes, with one dataframe for each chain in the analysis. The data frames are structured with ncol = number of days in the analysis, and nrow = number of MCMC samples. The Rt is calculated using the sampled beta trajectory and gamma value from each MCMC step.
load_rt_trajectories(folderpath)a list of Rt trajectory dataframes